Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 23503
Gene Symbol: ZFYVE26
ZFYVE26
0.110 CausalMutation disease CLINVAR [Koryak of Kamchatka. The genetic differentiation of the population]. 6944241 1981
Entrez Id: 1130
Gene Symbol: LYST
LYST
0.310 Biomarker disease GENOMICS_ENGLAND [Hereditary spastic paraplegia: up to date]. 25519960 2014
Entrez Id: 3897
Gene Symbol: L1CAM
L1CAM
0.110 CausalMutation disease CLINVAR X-linked spastic paraplegia (SPG1), MASA syndrome and X-linked hydrocephalus result from mutations in the L1 gene. 7920659 1994
Entrez Id: 9420
Gene Symbol: CYP7B1
CYP7B1
0.120 GeneticVariation disease BEFREE White matter lesions in spastic paraplegia with mutations in SPG5/CYP7B1. 19187859 2009
Entrez Id: 65055
Gene Symbol: REEP1
REEP1
0.130 GeneticVariation disease BEFREE WGS and replication studies identified three pathogenic variants in PPMS patients that cause neurological disorders sharing features with MS: KIF5A p.Ala361Val in spastic paraplegia 10; MLC1 p.Pro92Ser in megalencephalic leukodystrophy with subcortical cysts, and REEP1 c.606 + 43G>T in Spastic Paraplegia 31. 29908077 2018
Entrez Id: 23209
Gene Symbol: MLC1
MLC1
0.010 GeneticVariation disease BEFREE WGS and replication studies identified three pathogenic variants in PPMS patients that cause neurological disorders sharing features with MS: KIF5A p.Ala361Val in spastic paraplegia 10; MLC1 p.Pro92Ser in megalencephalic leukodystrophy with subcortical cysts, and REEP1 c.606 + 43G>T in Spastic Paraplegia 31. 29908077 2018
Entrez Id: 3798
Gene Symbol: KIF5A
KIF5A
0.190 GeneticVariation disease BEFREE WGS and replication studies identified three pathogenic variants in PPMS patients that cause neurological disorders sharing features with MS: KIF5A p.Ala361Val in spastic paraplegia 10; MLC1 p.Pro92Ser in megalencephalic leukodystrophy with subcortical cysts, and REEP1 c.606 + 43G>T in Spastic Paraplegia 31. 29908077 2018
Entrez Id: 113612
Gene Symbol: CYP2U1
CYP2U1
0.130 GeneticVariation disease BEFREE We report three patients in a consanguineous family harboring the novel homozygous c.1168C>T (p.R390*) in SPG56/CYP2U1, and showing a pigmentary degenerative maculopathy associated with progressive spastic paraplegia. 26914923 2016
Entrez Id: 51062
Gene Symbol: ATL1
ATL1
0.140 GeneticVariation disease BEFREE We report a new heterozygous S398F mutation in exon 12 of the SPG3A gene causing a very early-onset spastic paraplegia in association with motor axonal neuropathy in a 4-year-old girl resembling diplegic cerebral palsy. 19735987 2010
Entrez Id: 203228
Gene Symbol: C9orf72
C9orf72
0.010 Biomarker disease BEFREE We recruited 112 genetically unidentified SPG patients, 68 SPG4 patients and 313 controls in mainland China to determine if hexanucleotide repeat of C9orf72 plays a role in spastic paraplegia. 25284081 2014
Entrez Id: 10717
Gene Symbol: AP4B1
AP4B1
0.120 GeneticVariation disease BEFREE We propose that AP4B1 mutations cause SPG47 and should be considered in early onset spastic paraplegia with intellectual disability. 22290197 2012
Entrez Id: 2581
Gene Symbol: GALC
GALC
0.020 GeneticVariation disease BEFREE We examined galactosylceramidase (GALC) cDNA in four Japanese patients with adult onset globoid cell leukodystrophy (Krabbe disease; AO-GLD) by polymerase chain reaction/single-strand conformation polymorphism (PCR-SSCP) analysis, subsequent sequence determination, and restriction enzyme digestion of PCR products, initial symptoms were the onset of slowly progressive spastic paraplegia from the middle of the second decade, and all patients had diminished GALC activity in their leukocytes. 9272171 1997
Entrez Id: 6683
Gene Symbol: SPAST
SPAST
0.200 GeneticVariation disease BEFREE We conclude that this kindred demonstrates a considerable overlap between cerebellar ataxia and spastic paraplegia, emphasizing the marked clinical heterogeneity of HSP associated with spastin mutations. 15667412 2004
Entrez Id: 1130
Gene Symbol: LYST
LYST
0.310 Biomarker disease GENOMICS_ENGLAND We also identified the mutation of the LYST gene, that is causative gene for Chediak-Higashi syndrome, for the autosomal recessive complicated spastic paraplegia with cerebellar ataxia and neuropathy. 25519961 2014
Entrez Id: 5354
Gene Symbol: PLP1
PLP1
0.140 Biomarker disease BEFREE Two other less severe phenotypes were subsequently described, including the spastic paraplegia syndrome and PLP1-null disease. 29478609 2018
Entrez Id: 5354
Gene Symbol: PLP1
PLP1
0.140 GeneticVariation disease BEFREE Transgenic mice carrying extra copies of the Plp gene provide a valid model of PMD/SPG due to gene duplication. 9672418 1998
Entrez Id: 5744
Gene Symbol: PTHLH
PTHLH
0.010 GeneticVariation disease BEFREE Transgenic mice carrying extra copies of the Plp gene provide a valid model of PMD/SPG due to gene duplication. 9672418 1998
Entrez Id: 25824
Gene Symbol: PRDX5
PRDX5
0.010 GeneticVariation disease BEFREE Transgenic mice carrying extra copies of the Plp gene provide a valid model of PMD/SPG due to gene duplication. 9672418 1998
Entrez Id: 57026
Gene Symbol: PDXP
PDXP
0.010 GeneticVariation disease BEFREE Transgenic mice carrying extra copies of the Plp gene provide a valid model of PMD/SPG due to gene duplication. 9672418 1998
Entrez Id: 6683
Gene Symbol: SPAST
SPAST
0.200 GeneticVariation disease BEFREE To assess the frequency of SPG4 mutation in patients with spastic paraplegia but without family histories. 16055926 2006
Entrez Id: 80208
Gene Symbol: SPG11
SPG11
0.180 GeneticVariation disease BEFREE This study showed a successful clinical application of whole-exome sequencing in spastic paraplegia and demonstrated a further evidence of allelic heterogeneity in SPG11. 26671123 2015
Entrez Id: 2670
Gene Symbol: GFAP
GFAP
0.010 Biomarker disease BEFREE This review centers on important recent advances in the understanding of the role of glial fibrillary acidic protein in Alexander disease and of proteolipid protein in hypomyelinating disorders such as Pelizaeus-Merzbacher and spastic paraplegia. 11723390 2001
Entrez Id: 23204
Gene Symbol: ARL6IP1
ARL6IP1
0.410 Biomarker disease BEFREE This report highlights the role of ARL6IP1 in the pathophysiology of insensitivity to pain and spastic paraplegia. 28471035 2018
Entrez Id: 23204
Gene Symbol: ARL6IP1
ARL6IP1
0.410 Biomarker disease GENOMICS_ENGLAND This report highlights the role of ARL6IP1 in the pathophysiology of insensitivity to pain and spastic paraplegia. 28471035 2018
Entrez Id: 57309
Gene Symbol: SPG14
SPG14
0.010 GeneticVariation disease BEFREE This is the first clinical description of a pure form spastic paraplegia in a non-consanguineous family associated with the SPG14 locus. 26671141 2015